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  5. Cpa|evm.model.tig00000178.59

Cpa|evm.model.tig00000178.59 (tig00000178_g12771.t1)


Aliases : tig00000178_g12771.t1

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component


Gene families : OG_01_0001230 (OrthoFinder) Phylogenetic Tree(s): OG0001230_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000178.59
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cre14.g627488 30776237 Glutamyl-tRNA(Gln) amidotransferase subunit B,... 0.03 OrthoFinder
Transcript_contig_56696 56696 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit... 0.03 OrthoFinder
XM_002503430.1 MICPUN_83264, 83264 Asn/Gln amidotransferase; Aspartyl/Glutamyl-tRNA(Gln)... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 198 300
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 322 445
No external refs found!