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  5. lcl|BLLF01003501.1_cds_GFH27512.1_21989

lcl|BLLF01003501.1_cds_GFH27512.1_21989 (HaLaN_25843, GFH27512)


Aliases : HaLaN_25843, GFH27512

Description : Hypothetical protein


Gene families : OG_01_0000182 (OrthoFinder) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003501.1_cds_GFH27512.1_21989
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Cre02.g117900 30785394 RNA processing.RNA decay.exosome complex.associated... 0.03 OrthoFinder
Cz08g28230.t1 No alias rRNA-processing arch domain; Helicase, C-terminal;... 0.02 OrthoFinder
Dusal.0215s00004.1 33185763 ATP-dependent RNA helicase Ski2, C-terminal; Helicase,... 0.06 OrthoFinder
EOD14490 No alias DEAD/DEAH box helicase domain [Interproscan]. 0.01 OrthoFinder
EOD25937 No alias Helicase, C-terminal; rRNA-processing arch domain;... 0.02 OrthoFinder
EOD31566 No alias Helicase, C-terminal; rRNA-processing arch domain;... 0.02 OrthoFinder
OT_01G02950.1 No alias ATP-dependent RNA helicase Ski2, C-terminal; Ski2,... 0.02 OrthoFinder
OT_06G03030.1 No alias ATP-dependent RNA helicase Ski2, C-terminal; Helicase,... 0.03 OrthoFinder
OT_09G02900.1 No alias ATP-dependent RNA helicase Ski2, C-terminal;... 0.02 OrthoFinder
PTI_28G01510.1 No alias ATP-dependent RNA helicase Ski2, C-terminal; Helicase,... 0.02 OrthoFinder
Sro587_g171320.1 Contig2233.g18555 Viralicidic activity 2-like 2 0.02 OrthoFinder
XM_002500240.1 MICPUN_78446, 78446 Helicase, C-terminal; ATP-dependent RNA helicase Ski2,... 0.03 OrthoFinder
XM_002506163.1 MICPUN_88392, 88392 ATP-dependent RNA helicase Ski2, C-terminal;... 0.03 OrthoFinder
lcl|BLLF01005152.1_cds_GFH30799.1_25276 HaLaN_29719, GFH30799 rRNA-processing arch domain; ATP-dependent RNA helicase... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61094.1_711 PRW61094 Superkiller viralicidic activity 2-like 2 isoform B 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61095.1_712 PRW61095 Superkiller viralicidic activity 2-like 2 isoform A 0.02 OrthoFinder
lcl|LHPG02000027.1_cds_PRW05917.1_5938 PRW05917 Superkiller viralicidic activity 2-like 2 isoform B 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006470 protein dephosphorylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!