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  5. lcl|BLLF01003481.1_cds_GFH27452.1_21929

lcl|BLLF01003481.1_cds_GFH27452.1_21929 (HaLaN_25773, GFH27452)


Aliases : HaLaN_25773, GFH27452

Description : DNA mismatch repair protein MSH5


Gene families : OG_01_0003551 (OrthoFinder) Phylogenetic Tree(s): OG0003551_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003481.1_cds_GFH27452.1_21929
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cre16.g684155 30777752 No description available 0.02 OrthoFinder
Vocar.0001s0385.1 32884246 Sister chromatid cohesion protein Dcc1 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR007696 DNA_mismatch_repair_MutS_core 62 142
No external refs found!