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Aliases : HaLaN_25053, GFH26835
Description : AAA domain-containing protein
Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01003257.1_cds_GFH26835.1_21312 | |
| Cluster | HCCA: Cluster_284 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00022075.42 | tig00022075_g23603.t1 | ATP-dependent zinc metalloprotease FTSH, chloroplastic... | 0.02 | OrthoFinder | |
| Cre07.g352350 | 30774541 | ATP-dependent zinc metalloprotease FTSH, chloroplastic... | 0.03 | OrthoFinder | |
| Cz05g27050.t1 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... | 0.04 | OrthoFinder | |
| Cz10g22210.t1 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... | 0.02 | OrthoFinder | |
| Cz13g18040.t1 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... | 0.05 | OrthoFinder | |
| Dusal.0274s00008.1 | 33185615 | ATPase, AAA-type, core; Peptidase M41 [Interproscan]. | 0.04 | OrthoFinder | |
| OT_10G01100.1 | No alias | Peptidase M41; AAA ATPase, AAA+ lid domain; ATPase,... | 0.01 | OrthoFinder | |
| OT_11G02060.1 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... | 0.04 | OrthoFinder | |
| OT_16G00870.1 | No alias | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.03 | OrthoFinder | |
| Transcript_contig_54885 | 54885 | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.02 | OrthoFinder | |
| Vocar.0005s0095.1 | 32884072 | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.02 | OrthoFinder | |
| XM_002503449.1 | MICPUN_59866, 59866 | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.01 | OrthoFinder | |
| XM_002503935.1 | MICPUN_83563, 83563 | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... | 0.02 | OrthoFinder | |
| XM_002508006.1 | MICPUN_94954, 94954 | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.02 | OrthoFinder | |
| XM_003055594.1 | MicpuC2_1627, 1627 | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... | 0.04 | OrthoFinder | |
| XM_003058612.1 | MicpuC2_58438, 58438 | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Enrichment |
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Enrichment |
| MF | GO:0003879 | ATP phosphoribosyltransferase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006547 | histidine metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| CC | GO:0009507 | chloroplast | IEP | Enrichment |
| CC | GO:0009536 | plastid | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| CC | GO:0030120 | vesicle coat | IEP | Enrichment |
| CC | GO:0030126 | COPI vesicle coat | IEP | Enrichment |
| CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0031369 | translation initiation factor binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1902600 | proton transmembrane transport | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |