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  5. lcl|BLLF01003179.1_cds_GFH26609.1_21086

lcl|BLLF01003179.1_cds_GFH26609.1_21086 (HaLaN_24785, GFH26609)


Aliases : HaLaN_24785, GFH26609

Description : 50S ribosomal protein L27


Gene families : OG_01_0000894 (OrthoFinder) Phylogenetic Tree(s): OG0000894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003179.1_cds_GFH26609.1_21086
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.47 tig00022075_g23608.t1 50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea 0.03 OrthoFinder
Cre06.g300800 30778964, PRPL27 50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana 0.08 OrthoFinder
Cz08g09200.t1 No alias Ribosomal protein L27 [Interproscan]. 0.07 OrthoFinder
Dusal.1029s00008.1 33196318 Ribosomal protein L27 [Interproscan]. 0.03 OrthoFinder
OT_07G01560.1 No alias Ribosomal protein L27 [Interproscan]. 0.04 OrthoFinder
Sro1328_g263130.1 Contig1099.g10653 Protein L27 0.03 OrthoFinder
Sro51_chlor_g029890.1 Rpl27 Rpl27 0.02 OrthoFinder
TPCG01990.1 No alias Ribosomal protein L27 [Interproscan]. 0.02 OrthoFinder
TPCG03010.1 No alias Ribosomal protein L27 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0304.1 32885658 Ribosomal protein L27 [Interproscan]. 0.03 OrthoFinder
XM_002499554.1 MICPUN_56110, 56110 Ribosomal protein L27 (RPL27) 0.03 OrthoFinder
lcl|BLLF01003289.1_cds_GFH26922.1_21399 HaLaN_25156, GFH26922 50S ribosomal protein L27 0.03 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32583.1_3993 PRW32583 50S ribosomal L27 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Enrichment
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033176 proton-transporting V-type ATPase complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 32 110
No external refs found!