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  5. lcl|BLLF01003159.1_cds_GFH26539.1_21016

lcl|BLLF01003159.1_cds_GFH26539.1_21016 (HaLaN_24706, GFH26539)


Aliases : HaLaN_24706, GFH26539

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000719 (OrthoFinder) Phylogenetic Tree(s): OG0000719_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003159.1_cds_GFH26539.1_21016
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cre01.g012650 30788583 Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder
Cre01.g012700 30789326 Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder
Cre01.g012750 30788518 Solute transport.channels.VIC superfamily.voltage-gated... 0.02 OrthoFinder
Cre01.g012850 30789525 Solute transport.channels.VIC superfamily.voltage-gated... 0.03 OrthoFinder
Dusal.0839s00002.1 33200564 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Dusal.0944s00002.1 33188585 Ankyrin repeats (many copies); Ankyrin repeat-containing... 0.02 OrthoFinder
Dusal.1230s00001.1 33193008 Ankyrin repeat-containing domain [Interproscan]. 0.02 OrthoFinder
OT_13G00470.1 No alias Ankyrin repeat-containing domain; Ion transport domain;... 0.02 OrthoFinder
Transcript_contig_54646 54646 Ankyrin repeat-containing domain; Ion transport domain;... 0.01 OrthoFinder
Vocar.0045s0071.1 32887785 Ankyrin repeat-containing domain; Ion transport domain... 0.01 OrthoFinder
Vocar.0045s0072.1 32887766 Ankyrin repeat-containing domain; Ion transport domain... 0.02 OrthoFinder
lcl|BLLF01000948.1_cds_GFH16117.1_10594 HaLaN_12477, GFH16117 Ion transport domain; Ankyrin repeat-containing domain... 0.03 OrthoFinder
lcl|BLLF01001040.1_cds_GFH16710.1_11187 HaLaN_13187, GFH16710 Cyclic nucleotide-binding domain-containing protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 13 226
No external refs found!