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  5. lcl|BLLF01003069.1_cds_GFH26246.1_20723

lcl|BLLF01003069.1_cds_GFH26246.1_20723 (HaLaN_24363, GFH26246)


Aliases : HaLaN_24363, GFH26246

Description : C2H2-type domain-containing protein


Gene families : OG_01_0004169 (OrthoFinder) Phylogenetic Tree(s): OG0004169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003069.1_cds_GFH26246.1_20723
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cz02g26050.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz02g26060.t1 No alias Hypothetical protein 0.02 OrthoFinder
Dusal.0299s00009.1 33185779 Domain of unknown function DUF629 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!