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  5. lcl|BLLF01002866.1_cds_GFH25618.1_20095

lcl|BLLF01002866.1_cds_GFH25618.1_20095 (HaLaN_23610, GFH25618)


Aliases : HaLaN_23610, GFH25618

Description : Channelopsin 1


Gene families : OG_01_0005202 (OrthoFinder) Phylogenetic Tree(s): OG0005202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002866.1_cds_GFH25618.1_20095
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000849.19 tig00000849_g4760.t2 No description available 0.01 OrthoFinder
Cre02.g085257 30785561 No description available 0.01 OrthoFinder
Cre14.g611300 30776530, COP3 No description available 0.02 OrthoFinder
Dusal.0345s00016.1 33198536 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.01 OrthoFinder
Vocar.0028s0176.1 32895533 Archaeal/bacterial/fungal rhodopsins [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001841.1_cds_GFH21497.1_15974 HaLaN_18813, GFH21497 Putative channel rhodopsin 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR001425 Arc/bac/fun_rhodopsins 65 268
No external refs found!