1. Home
  2. Species
  3. Haematococcus lacustris
  4. Sequence
  5. lcl|BLLF01002576.1_cds_GFH24586.1_19063

lcl|BLLF01002576.1_cds_GFH24586.1_19063 (HaLaN_22406, GFH24586)


Aliases : HaLaN_22406, GFH24586

Description : S15 ribosomal protein


Gene families : OG_01_0001210 (OrthoFinder) Phylogenetic Tree(s): OG0001210_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002576.1_cds_GFH24586.1_19063
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.61 tig00020830_g14444.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cre08.g360900 30773772, RPS15 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder
Cz15g01190.t1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.03 OrthoFinder
EOD22236 No alias Ribosomal protein S19/S15 [Interproscan]. 0.02 OrthoFinder
OT_12G02670.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.04 OrthoFinder
PTI_06G03210.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.06 OrthoFinder
Sro1505_g278180.1 Contig474.g6440 40S ribosomal protein S15 0.05 OrthoFinder
Sro51_chlor_g029510.1 Rps19 Rps19 0.01 OrthoFinder
Sro884_mit_g215570.1 Rps19 Rps19 0.01 OrthoFinder
TP03G03270.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.04 OrthoFinder
XM_002507550.1 MICPUN_89585, 89585 Ribosomal protein S19/S15 [Interproscan]. 0.02 OrthoFinder
XM_003054821.1 MicpuC2_30685, 30685 Ribosomal protein S19/S15 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33918.1_2873 PRW33918 40S ribosomal S15 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500014.1_8967 KAA8500014 40S ribosomal protein S15 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
BP GO:0051179 localization IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 42 127
No external refs found!