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  5. Cpa|evm.model.tig00021531.8

Cpa|evm.model.tig00021531.8 (tig00021531_g22171.t1)


Aliases : tig00021531_g22171.t1

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ32/33 splicing factor


Gene families : OG_01_0002944 (OrthoFinder) Phylogenetic Tree(s): OG0002944_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021531.8
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278239 30779801 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder
Cz06g08020.t1 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
Cz13g16010.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
EOD38145 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54292 54292 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0045048 protein insertion into ER membrane IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051205 protein insertion into membrane IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 69
IPR001878 Znf_CCHC 133 148
IPR001878 Znf_CCHC 111 126
No external refs found!