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Aliases : HaLaN_20026, GFH22547
Description : Protein SDA1
Gene families : OG_01_0002063 (OrthoFinder) Phylogenetic Tree(s): OG0002063_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01002063.1_cds_GFH22547.1_17024 | |
| Cluster | HCCA: Cluster_211 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000545.36 | tig00000545_g2009.t1 | No description available | 0.1 | OrthoFinder | |
| Cre06.g277050 | 30778765 | No description available | 0.1 | OrthoFinder | |
| Cz01g17100.t1 | No alias | SDA1 domain; Uncharacterised domain NUC130/133,... | 0.06 | OrthoFinder | |
| Dusal.2963s00001.1 | 33197632 | Hypothetical protein | 0.02 | OrthoFinder | |
| Dusal.3212s00001.1 | 33196450 | Uncharacterised domain NUC130/133, N-terminal [Interproscan]. | 0.04 | OrthoFinder | |
| EOD05216 | No alias | Uncharacterised domain NUC130/133, N-terminal [Interproscan]. | 0.02 | OrthoFinder | |
| EOD17600 | No alias | Uncharacterised domain NUC130/133, N-terminal; SDA1... | 0.03 | OrthoFinder | |
| EOD19673 | No alias | SDA1 domain [Interproscan]. | 0.02 | OrthoFinder | |
| OT_17G01600.1 | No alias | SDA1 domain; Uncharacterised domain NUC130/133,... | 0.08 | OrthoFinder | |
| PTI_08G01870.1 | No alias | SDA1 domain [Interproscan]. | 0.06 | OrthoFinder | |
| Sro868_g213380.1 | Contig2961.g23540 | Protein SDA1 homolog | 0.06 | OrthoFinder | |
| TP06G04880.1 | No alias | SDA1 domain [Interproscan]. | 0.04 | OrthoFinder | |
| Transcript_contig_55064 | 55064 | Uncharacterised domain NUC130/133, N-terminal; SDA1... | 0.03 | OrthoFinder | |
| XM_002502232.1 | MICPUN_82167, 82167 | Uncharacterised domain NUC130/133, N-terminal; SDA1... | 0.1 | OrthoFinder | |
| XM_003063989.1 | MicpuC2_23401, 23401 | Uncharacterised domain NUC130/133, N-terminal; SDA1... | 0.08 | OrthoFinder | |
| lcl|LHPG02000018.1_cds_PRW32895.1_3700 | PRW32895 | SDA1 | 0.09 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| CC | GO:0009507 | chloroplast | IEP | Enrichment |
| CC | GO:0009536 | plastid | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| CC | GO:0030120 | vesicle coat | IEP | Enrichment |
| CC | GO:0030126 | COPI vesicle coat | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0043038 | amino acid activation | IEP | Enrichment |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| No external refs found! |