Aliases : HaLaN_19715, GFH22273
Description : DNA helicase
Gene families : OG_01_0003992 (OrthoFinder) Phylogenetic Tree(s): OG0003992_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01002005.1_cds_GFH22273.1_16750 | |
Cluster | HCCA: Cluster_196 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre01.g023150 | 30789174, MCM5 | Cell cycle.interphase.DNA replication.preinitiation.MCM... | 0.05 | OrthoFinder | |
Cz07g07100.t1 | No alias | MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan]. | 0.08 | OrthoFinder | |
Dusal.0029s00046.1 | 33203778 | MCM domain; MCM OB domain [Interproscan]. | 0.01 | OrthoFinder | |
OT_04G00460.1 | No alias | MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... | 0.03 | OrthoFinder | |
PTI_05G00150.1 | No alias | MCM domain; MCM, AAA-lid domain; MCM OB domain [Interproscan]. | 0.05 | OrthoFinder | |
Sro2445_g327910.1 | Contig786.g8798 | Zygotic DNA replication licensing factor mcm3 | 0.04 | OrthoFinder | |
Transcript_contig_67480 | 67480 | MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... | 0.04 | OrthoFinder | |
Vocar.0007s0287.1 | 32887930 | MCM N-terminal domain; MCM, AAA-lid domain; MCM OB... | 0.08 | OrthoFinder | |
lcl|LHPG02000009.1_cds_PRW55991.1_10189 | PRW55991 | DNA replication licensing factor MCM5 | 0.06 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494550.1_3080 | KAA8494550 | DNA replication licensing factor MCM5 | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006270 | DNA replication initiation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000444 | MIS12/MIND type complex | IEP | Enrichment |
CC | GO:0000808 | origin recognition complex | IEP | Enrichment |
CC | GO:0000818 | nuclear MIS12/MIND complex | IEP | Enrichment |
MF | GO:0003883 | CTP synthase activity | IEP | Enrichment |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Enrichment |
MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Enrichment |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0006260 | DNA replication | IEP | Enrichment |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Enrichment |
MF | GO:0008017 | microtubule binding | IEP | Enrichment |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
MF | GO:0015631 | tubulin binding | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
MF | GO:0034061 | DNA polymerase activity | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No external refs found! |