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  5. lcl|BLLF01002005.1_cds_GFH22273.1_16750

lcl|BLLF01002005.1_cds_GFH22273.1_16750 (HaLaN_19715, GFH22273)


Aliases : HaLaN_19715, GFH22273

Description : DNA helicase


Gene families : OG_01_0003992 (OrthoFinder) Phylogenetic Tree(s): OG0003992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002005.1_cds_GFH22273.1_16750
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Cre01.g023150 30789174, MCM5 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.05 OrthoFinder
Cz07g07100.t1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain [Interproscan]. 0.08 OrthoFinder
Dusal.0029s00046.1 33203778 MCM domain; MCM OB domain [Interproscan]. 0.01 OrthoFinder
OT_04G00460.1 No alias MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.03 OrthoFinder
PTI_05G00150.1 No alias MCM domain; MCM, AAA-lid domain; MCM OB domain [Interproscan]. 0.05 OrthoFinder
Sro2445_g327910.1 Contig786.g8798 Zygotic DNA replication licensing factor mcm3 0.04 OrthoFinder
Transcript_contig_67480 67480 MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.04 OrthoFinder
Vocar.0007s0287.1 32887930 MCM N-terminal domain; MCM, AAA-lid domain; MCM OB... 0.08 OrthoFinder
lcl|LHPG02000009.1_cds_PRW55991.1_10189 PRW55991 DNA replication licensing factor MCM5 0.06 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494550.1_3080 KAA8494550 DNA replication licensing factor MCM5 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 2 171
IPR041562 MCM_lid 201 234
No external refs found!