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  5. Cpa|evm.model.tig00021493.35

Cpa|evm.model.tig00021493.35 (tig00021493_g21880.t1)


Aliases : tig00021493_g21880.t1

Description : Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase


Gene families : OG_01_0001262 (OrthoFinder) Phylogenetic Tree(s): OG0001262_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021493.35
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Cre01.g050100 30789106, DPD1 Amino acid metabolism.biosynthesis.aspartate... 0.02 OrthoFinder
Sro2087_g313880.1 Contig3974.g30520 Diaminopimelate decarboxylase 0.02 OrthoFinder
SymbC1.scaffold14624.1 14624.1 Orn/DAP/Arg decarboxylase 2, C-terminal; Putative... 0.01 OrthoFinder
TP01G01280.1 No alias Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg... 0.03 OrthoFinder
Vocar.0001s0603.1 32885024 Orn/DAP/Arg decarboxylase 2, C-terminal; Orn/DAP/Arg... 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59873.1_6738 PRW59873 Diaminopimelate decarboxylase chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR022644 De-COase2_N 146 393
IPR022643 De-COase2_C 139 482
No external refs found!