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  5. Cpa|evm.model.tig00021462.43

Cpa|evm.model.tig00021462.43 (tig00021462_g21606.t1)


Aliases : tig00021462_g21606.t1

Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin I complex.CAP-H component


Gene families : OG_01_0002826 (OrthoFinder) Phylogenetic Tree(s): OG0002826_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021462.43
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre13.g589300 30784001 Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder
Cz08g13030.t1 No alias Condensin complex subunit 2/barren [Interproscan]. 0.04 OrthoFinder
EOD09357 No alias Condensin complex subunit 2/barren [Interproscan]. 0.03 OrthoFinder
OT_16G00210.1 No alias Condensin complex subunit 2/barren [Interproscan]. 0.05 OrthoFinder
PTI_10G00180.1 No alias Condensin complex subunit 2/barren [Interproscan]. 0.05 OrthoFinder
Sro293_g109920.1 Contig3203.g25313 Condensin complex subunit 2 0.06 OrthoFinder
TP03G00600.1 No alias Condensin complex subunit 2/barren [Interproscan]. 0.03 OrthoFinder
Transcript_contig_57817 57817 Condensin complex subunit 2/barren [Interproscan]. 0.01 OrthoFinder
Transcript_contig_60399 60399 Condensin complex subunit 2/barren [Interproscan]. 0.01 OrthoFinder
XM_002508713.1 MICPUN_61922, 61922 Condensin complex component, barren domain-containing... 0.05 OrthoFinder
XM_003063000.1 MicpuC2_48690, 48690 Condensin complex component, barren domain-containing... 0.02 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32517.1_3992 PRW32517 Condensin complex subunit 2 0.04 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492811.1_2547 KAA8492811 Condensin complex subunit 2 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEA Interproscan
BP GO:0007076 mitotic chromosome condensation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR022816 Condensin_barren_su2 32 185
IPR022816 Condensin_barren_su2 472 518
IPR022816 Condensin_barren_su2 426 468
No external refs found!