lcl|BLLF01001302.1_cds_GFH18442.1_12919 (HaLaN_15252, GFH18442)

Aliases : HaLaN_15252, GFH18442

Description : ATPase, AAA-type, core; Clp ATPase, C-terminal [Interproscan].

Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01001302.1_cds_GFH18442.1_12919
Cluster	HCCA: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001416.8	tig00001416_g8954.t1	Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00020563.86	tig00000655_g2853.t1	External stimuli response.temperature.Hsp...	0.02	OrthoFinder
Cre10.g465550	30790230, CLPD1	Chaperone protein ClpB2, chloroplastic OS=Oryza sativa...	0.02	OrthoFinder
Transcript_contig_54694	54694	ClpA/ClpB, AAA lid domain; Clp ATPase, C-terminal;...	0.01	OrthoFinder
Vocar.0009s0332.1	32893470	ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,...	0.02	OrthoFinder
Vocar.0029s0077.1	32887567	ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Enrichment
MF	GO:0004673	protein histidine kinase activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
MF	GO:0140299	small molecule sensor activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR019489	Clp_ATPase_C	152	207
IPR003959	ATPase_AAA_core	1	145

External Links

No external refs found!