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  5. lcl|BLLF01001253.1_cds_GFH18143.1_12620

lcl|BLLF01001253.1_cds_GFH18143.1_12620 (HaLaN_14894, GFH18143)


Aliases : HaLaN_14894, GFH18143

Description : Serine hydroxymethyltransferase


Gene families : OG_01_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001253.1_cds_GFH18143.1_12620
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001130.31 tig00001130_g7262.t1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder
OT_03G00940.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
OT_14G02690.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.01 OrthoFinder
TP04G01760.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.03 OrthoFinder
Vocar.0041s0018.1 32888726 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.03 OrthoFinder
XM_003059639.1 MicpuC2_49634, 49634 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61055.1_24 PRW61055 Serine hydroxymethyltransferase 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 44 245
No external refs found!