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  5. lcl|BLLF01001229.1_cds_GFH17968.1_12445

lcl|BLLF01001229.1_cds_GFH17968.1_12445 (HaLaN_14697, GFH17968)


Aliases : HaLaN_14697, GFH17968

Description : Histone H2A


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001229.1_cds_GFH17968.1_12445
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cre06.g266700 30779158 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g268050 30779224, HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g268300 30778781, HTA9 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g271350 30779391 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g273900 30779778 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g274200 30778751 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g274800 30780111, HTA26 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g275850 30779335 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g276500 30778822, HTA23 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g276950 30778754, HTA24 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre12.g504750 30792225 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre12.g505550 30793129 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre12.g506250 30793152, HTA18 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre17.g708550 30781878, HTA20 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre17.g709200 30782358 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre17.g711700 30781638, HTA5 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre17.g713400 30781819 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cz05g04180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz07g08180.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz08g27130.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Cz18g11100.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0002s00036.1 33187941 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Dusal.0152s00023.1 33186201 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492219.1_5402 KAA8492219 Histone H2A.V 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 84 131
IPR032454 Histone_H2A_C 134 167
No external refs found!