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  5. lcl|BLLF01001006.1_cds_GFH16502.1_10979

lcl|BLLF01001006.1_cds_GFH16502.1_10979 (HaLaN_12930, GFH16502)


Aliases : HaLaN_12930, GFH16502

Description : Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan].


Gene families : OG_01_0000580 (OrthoFinder) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|BLLF01001006.1_cds_GFH16502.1_10979
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.112 tig00020614_g12229.t1 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.01 OrthoFinder
Cre14.g613900 30776339, CYCT1 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.01 OrthoFinder
Cz01g11150.t1 No alias Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
OT_02G02310.1 No alias Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0057s0006.1 32894712 Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
XM_003056088.1 MicpuC2_64909, 64909 Hypothetical protein (CYCT) 0.02 OrthoFinder
lcl|BLLF01002155.1_cds_GFH22926.1_17403 HaLaN_20462, GFH22926 Cyclin, N-terminal [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 166 260
IPR006671 Cyclin_N 12 152
No external refs found!