- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HaLaN_12556, GFH16182
Description : PAS domain-containing protein
Gene families : OG_01_0000027 (OrthoFinder) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000958.1_cds_GFH16182.1_10659 | |
| Cluster | HCCA: Cluster_242 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000025.37 | tig00000025_g7945.t1 | No description available | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00000025.38 | tig00000025_g7945.t1 | No description available | 0.01 | OrthoFinder | |
| Cpa|evm.model.tig00000025.39 | tig00000025_g7945.t1 | No description available | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00000317.33 | tig00000317_g24044.t1 | No description available | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00021522.9 | tig00021522_g22101.t1 | No description available | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00021537.33 | tig00021537_g22286.t1 | No description available | 0.02 | OrthoFinder | |
| Cre02.g142166 | 30786493 | No description available | 0.04 | OrthoFinder | |
| Cre05.g233650 | 30783131, FXL9 | No description available | 0.03 | OrthoFinder | |
| Cre07.g319650 | 30775131, FXL4 | No description available | 0.02 | OrthoFinder | |
| Cre09.g397000 | 30780571 | No description available | 0.01 | OrthoFinder | |
| Cre10.g457331 | 30790915 | No description available | 0.03 | OrthoFinder | |
| Cre10.g457400 | 30790407 | No description available | 0.02 | OrthoFinder | |
| Cre11.g469500 | 30776071 | No description available | 0.01 | OrthoFinder | |
| Cre13.g586700 | 30784046 | No description available | 0.02 | OrthoFinder | |
| Cre13.g587550 | 30783866 | No description available | 0.02 | OrthoFinder | |
| Cre17.g698903 | 30781618 | No description available | 0.03 | OrthoFinder | |
| Cre17.g708000 | 30782648, FAP260 | No description available | 0.01 | OrthoFinder | |
| Cz02g01210.t1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| Cz04g22190.t1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| Cz06g35270.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| Cz06g35280.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| Cz12g28200.t1 | No alias | PAS domain [Interproscan]. | 0.02 | OrthoFinder | |
| Cz15g11180.t1 | No alias | Hypothetical protein | 0.01 | OrthoFinder | |
| Cz15g19100.t1 | No alias | PAS domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0012s00037.1 | 33201991 | PAS domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0051s00004.1 | 33199001 | PAS domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.1094s00001.1 | 33191764 | Hypothetical protein | 0.03 | OrthoFinder | |
| Sro28_g018720.1 | Contig404.g5481 | Sensor protein FixL | 0.01 | OrthoFinder | |
| UNPLg00188.t1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| UNPLg00189.t1 | No alias | PAS domain [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0002s0204.1 | 32891156 | PAS domain; PAS fold [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0003s0436.1 | 32889288 | PAS domain [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0003s0445.1 | 32888873 | PAS domain; PAS fold [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0004s0312.1 | 32889633 | PAS fold [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0005s0217.1 | 32883525 | PAS domain [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0012s0063.1 | 32895032 | PAS domain [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0012s0199.1 | 32895061 | PAS fold [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0021s0101.1 | 32895906 | PAS domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000092.1_cds_GFH07404.1_1881 | HaLaN_02198, GFH07404 | PAS fold [Interproscan]. | 0.07 | OrthoFinder | |
| lcl|BLLF01000097.1_cds_GFH07482.1_1959 | HaLaN_02288, GFH07482 | PAS domain [Interproscan]. | 0.04 | OrthoFinder | |
| lcl|BLLF01002366.1_cds_GFH23804.1_18281 | HaLaN_21483, GFH23804 | Tiny macrocysts protein B | 0.05 | OrthoFinder | |
| lcl|BLLF01002984.1_cds_GFH25993.1_20470 | HaLaN_24060, GFH25993 | PAS domain [Interproscan]. | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005216 | ion channel activity | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |