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  5. lcl|BLLF01000916.1_cds_GFH15891.1_10368

lcl|BLLF01000916.1_cds_GFH15891.1_10368 (HaLaN_12212, GFH15891)


Aliases : HaLaN_12212, GFH15891

Description : AP complex subunit beta


Gene families : OG_01_0000809 (OrthoFinder) Phylogenetic Tree(s): OG0000809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000916.1_cds_GFH15891.1_10368
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020592.38 tig00020592_g11671.t1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder
Cre05.g234665 30783487, AP4B4 Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 OrthoFinder
Cre11.g478156 30775875 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder
Dusal.0391s00014.1 33187360 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.02 OrthoFinder
Dusal.0611s00004.1 33198402 Beta-adaptin appendage, C-terminal subdomain;... 0.04 OrthoFinder
EOD14985 No alias Adaptor protein 2 beta subunit 1 [Ensembl]. 0.02 OrthoFinder
EOD29886 No alias Adaptor protein complex 1 or 2, subunit beta B [Ensembl]. 0.04 OrthoFinder
Sro413_g138080.1 Contig3915.g30008 AP-1 complex subunit beta-1 0.02 OrthoFinder
XM_003058041.1 MicpuC2_16312, 16312 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.01 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20719.1_5171 PRW20719 Beta-adaptin C 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492396.1_9089 KAA8492396 Beta-adaptin-like protein C 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 80 265
IPR002553 Clathrin/coatomer_adapt-like_N 1 78
No external refs found!