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  5. lcl|BLLF01000899.1_cds_GFH15782.1_10259

lcl|BLLF01000899.1_cds_GFH15782.1_10259 (HaLaN_12076, GFH15782)


Aliases : HaLaN_12076, GFH15782

Description : Hypothetical protein


Gene families : OG_01_0000434 (OrthoFinder) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000899.1_cds_GFH15782.1_10259
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000013.1_cds_GFH05896.1_373 HaLaN_00437, GFH05896 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000836.1_cds_GFH15322.1_9799 HaLaN_11526, GFH15322 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001194.1_cds_GFH17739.1_12216 HaLaN_14433, GFH17739 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001392.1_cds_GFH19016.1_13493 HaLaN_15902, GFH19016 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001727.1_cds_GFH20927.1_15404 HaLaN_18135, GFH20927 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01006347.1_cds_GFH32173.1_26650 HaLaN_31350, GFH32173 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!