Aliases : HaLaN_11932, GFH15664
Description : SWAP/Surp [Interproscan].
Gene families : OG_01_0002237 (OrthoFinder) Phylogenetic Tree(s): OG0002237_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01000881.1_cds_GFH15664.1_10141 | |
Cluster | HCCA: Cluster_176 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021501.12 | tig00021501_g21952.t1 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.01 | OrthoFinder | |
XM_003062813.1 | MicpuC2_42493, 42493 | Splicing factor 3A subunit 1; SWAP/Surp [Interproscan]. | 0.01 | OrthoFinder | |
lcl|LHPG02000007.1_cds_PRW57503.1_8961 | PRW57503 | Putative splicing factor 3A subunit 1 isoform A | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0006396 | RNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Enrichment |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
BP | GO:0018196 | peptidyl-asparagine modification | IEP | Enrichment |
BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
CC | GO:0031090 | organelle membrane | IEP | Enrichment |
BP | GO:0036211 | protein modification process | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
BP | GO:0070085 | glycosylation | IEP | Enrichment |
BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000061 | Surp | 68 | 101 |
No external refs found! |