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  5. lcl|BLLF01000792.1_cds_GFH14993.1_9470

lcl|BLLF01000792.1_cds_GFH14993.1_9470 (HaLaN_11140, GFH14993)


Aliases : HaLaN_11140, GFH14993

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000792.1_cds_GFH14993.1_9470
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.3 tig00000254_g22448.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000405.21 tig00000405_g453.t1 No description available 0.02 OrthoFinder
Cre07.g333535 30775361 No description available 0.02 OrthoFinder
Cre10.g444850 30790145, CAV7 No description available 0.02 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.03 OrthoFinder
Cre17.g720600 30782719, CAV1 No description available 0.02 OrthoFinder
Cz08g09230.t1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
Cz08g19170.t1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
Dusal.0044s00007.1 33194913 Ion transport domain [Interproscan]. 0.02 OrthoFinder
EOD26654 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
EOD26760 No alias Ion transport domain [Interproscan]. 0.01 OrthoFinder
OT_01G01330.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_01G06690.1 No alias Ion transport domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54760 54760 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0321.1 32889539 Ion transport domain [Interproscan]. 0.01 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.01 OrthoFinder
XM_003062020.1 MicpuC2_21004, 21004 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11380.1_5857 HaLaN_06867, GFH11380 EF-hand domain-containing protein 0.01 OrthoFinder
lcl|BLLF01002156.1_cds_GFH22929.1_17406 HaLaN_20465, GFH22929 Voltage-gated Ca2+ channel, alpha subunit 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 73 183
No external refs found!