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  5. Cpa|evm.model.tig00000158.84

Cpa|evm.model.tig00000158.84 (tig00000158_g10189.t1)


Aliases : tig00000158_g10189.t1

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000158.84
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.190 tig00020553_g10680.t1 ABC transporter C family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020592.4 tig00020592_g11633.t1 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g21250.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD12783 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
PTI_02G00250.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
PTI_03G06590.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Sro1322_g262550.1 Contig3764.g28905 Multiple drug resistance-associated protein-like transporter 1 0.01 OrthoFinder
Sro183_g079600.1 Contig3056.g24305 Multiple drug resistance-associated protein-like transporter 1 0.02 OrthoFinder
Transcript_contig_54369 54369 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Transcript_contig_55599 55599 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56264 56264 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Vocar.0026s0119.1 32892596 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
XM_002499567.1 MICPUN_79103, 79103 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01000553.1_cds_GFH12907.1_7384 HaLaN_08686, GFH12907 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 706 973
IPR011527 ABC1_TM_dom 130 386
IPR003439 ABC_transporter-like_ATP-bd 445 578
No external refs found!