lcl|BLLF01000717.1_cds_GFH14366.1_8843 (HaLaN_10407, GFH14366)

Aliases : HaLaN_10407, GFH14366

Description : MPN domain-containing protein

Gene families : OG_01_0001747 (OrthoFinder) Phylogenetic Tree(s): OG0001747_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01000717.1_cds_GFH14366.1_8843
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000093.137	tig00000093_g3562.t1	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	OrthoFinder
Cre01.g016050	30789071, PRP8	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	OrthoFinder
Cz07g16060.t1	No alias	Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding;...	0.01	OrthoFinder
EOD24715	No alias	PROCT domain; RNA recognition motif, spliceosomal PrP8;...	0.03	OrthoFinder
OT_11G00220.1	No alias	Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding;...	0.02	OrthoFinder
Vocar.0007s0419.1	32887966	RNA recognition motif, spliceosomal PrP8;...	0.01	OrthoFinder
XM_002509351.1	MICPUN_107163, 107163	Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding;...	0.02	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW60964.1_258	PRW60964	Pre-mRNA-processing-splicing factor 8 isoform A	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	None	Extended
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	None	Extended
BP	GO:0000398	mRNA splicing, via spliceosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
MF	GO:0017069	snRNA binding	None	Extended
MF	GO:0017070	U6 snRNA binding	IEA	Interproscan
MF	GO:0030623	U5 snRNA binding	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0004107	chorismate synthase activity	IEP	Enrichment
MF	GO:0004672	protein kinase activity	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Enrichment
BP	GO:0006464	cellular protein modification process	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Enrichment
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Enrichment
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
BP	GO:0019538	protein metabolic process	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
BP	GO:0036211	protein modification process	IEP	Enrichment
BP	GO:0043412	macromolecule modification	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR012592	PROCN	2	329
IPR019581	Prp8_U5-snRNA-bd	726	859
IPR019580	Prp8_U6-snRNA-bd	958	1116
IPR019582	RRM_spliceosomal_PrP8	502	592
IPR012984	PROCT	1731	1847
IPR021983	PRP8_domainIV	1276	1505
IPR000555	JAMM/MPN+_dom	1618	1717

External Links

No external refs found!

lcl|BLLF01000717.1_cds_GFH14366.1_8843 (HaLaN_10407, GFH14366)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation