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  5. lcl|BLLF01000667.1_cds_GFH13918.1_8395

lcl|BLLF01000667.1_cds_GFH13918.1_8395 (HaLaN_09884, GFH13918)


Aliases : HaLaN_09884, GFH13918

Description : 60S ribosomal export protein NMD3


Gene families : OG_01_0001599 (OrthoFinder) Phylogenetic Tree(s): OG0001599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000667.1_cds_GFH13918.1_8395
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
Cre15.g640250 30783778 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder
OT_16G01030.1 No alias Nmd3, N-terminal [Interproscan]. 0.03 OrthoFinder
PTI_22G00570.1 No alias Nmd3, N-terminal [Interproscan]. 0.03 OrthoFinder
Sro84_g044850.1 Contig220.g2618 Ribosomal export protein NMD3 0.01 OrthoFinder
TP07G05980.1 No alias Nmd3, N-terminal [Interproscan]. 0.03 OrthoFinder
Vocar.0071s0020.1 32896155 Nmd3, N-terminal [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56676.1_9743 PRW56676 60S ribosomal export NMD3 0.02 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491051.1_9808 KAA8491051 60S ribosomal export protein NMD3 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
InterPro domains Description Start Stop
IPR007064 Nmd3_N 23 96
No external refs found!