lcl|BLLF01000640.1_cds_GFH13682.1_8159 (HaLaN_09616, GFH13682)

Aliases : HaLaN_09616, GFH13682

Description : DEAD/DEAH box helicase domain [Interproscan].

Gene families : OG_01_0001369 (OrthoFinder) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01000640.1_cds_GFH13682.1_8159
Cluster	HCCA: Cluster_220

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001086.7	tig00001086_g6841.t1	DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa...	0.02	OrthoFinder
EOD24599	No alias	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.02	OrthoFinder
TP02G08300.1	No alias	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.01	OrthoFinder
Transcript_contig_54291	54291	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.01	OrthoFinder
XM_002508054.1	MICPUN_60493, 60493	DEAD/DEAH box helicase	0.02	OrthoFinder
lcl\|LHPG02000004.1_cds_PRW59022.1_7074	PRW59022	DEAD-box ATP-dependent RNA helicase 8	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009966	regulation of signal transduction	IEP	Enrichment
BP	GO:0010646	regulation of cell communication	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
BP	GO:0023051	regulation of signaling	IEP	Enrichment
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Enrichment
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Enrichment
BP	GO:0048583	regulation of response to stimulus	IEP	Enrichment
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Enrichment
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	10	98

External Links

No external refs found!