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  5. Cpa|evm.model.tig00021357.35

Cpa|evm.model.tig00021357.35 (tig00021357_g20763.t1)


Aliases : tig00021357_g20763.t1

No description available


Gene families : OG_01_0004216 (OrthoFinder) Phylogenetic Tree(s): OG0004216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021357.35
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre16.g673700 30776822 No description available 0.07 OrthoFinder
Cz12g01040.t1 No alias AARP2CN; Ribosome biogenesis protein BMS1/TSR1,... 0.05 OrthoFinder
EOD14891 No alias Ribosome biogenesis protein BMS1/TSR1, C-terminal [Interproscan]. 0.06 OrthoFinder
OT_05G01110.1 No alias AARP2CN; Ribosome biogenesis protein BMS1/TSR1,... 0.03 OrthoFinder
PTI_01G04030.1 No alias Ribosome biogenesis protein BMS1/TSR1, C-terminal;... 0.04 OrthoFinder
Sro750_g196960.1 Contig993.g10031 Processing protein TSR1 homolog 0.07 OrthoFinder
TP13G00390.1 No alias Ribosome biogenesis protein BMS1/TSR1, C-terminal;... 0.04 OrthoFinder
Vocar.0018s0036.1 32898462 Ribosome biogenesis protein BMS1/TSR1, C-terminal;... 0.03 OrthoFinder
lcl|BLLF01002205.1_cds_GFH23161.1_17638 HaLaN_20731, GFH23161 Bms1-type G domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61435.1_318 PRW61435 Pre-rRNA-processing TSR1-like protein 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499720.1_8673 KAA8499720 Pre-rRNA-processing protein TSR1-like 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR012948 AARP2CN 226 303
IPR007034 BMS1_TSR1_C 460 743
No external refs found!