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Aliases : HaLaN_09308, GFH13424
Description : Regulator of chromosome condensation, RCC1 [Interproscan].
Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000610.1_cds_GFH13424.1_7901 | |
| Cluster | HCCA: Cluster_270 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre05.g230600 | 30783444 | External stimuli response.light.UV-B light.UVR8 photoreceptor | 0.02 | OrthoFinder | |
| Cre17.g742200 | 30782802 | Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cz07g00140.t1 | No alias | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0011s00055.1 | 33192146 | Regulator of chromosome condensation, RCC1; Regulator of... | 0.02 | OrthoFinder | |
| Dusal.0150s00017.1 | 33196063 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0193s00014.1 | 33196100 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| EOD05330 | No alias | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| EOD23616 | No alias | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| EOD26777 | No alias | Regulator of chromosome condensation (RCC1) repeat;... | 0.02 | OrthoFinder | |
| Sro2476_g328790.1 | Contig1473.g13496 | RCC1 and BTB domain-containing protein 2 | 0.01 | OrthoFinder | |
| Transcript_contig_10133 | 10133 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_1467 | 1467 | Hypothetical protein | 0.01 | OrthoFinder | |
| Transcript_contig_54555 | 54555 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_58480 | 58480 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0001s0860.1 | 32886041 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003064470.1 | MicpuC2_37010, 37010 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000013.1_cds_PRW44422.1_2159 | PRW44422 | E3 ubiquitin-ligase HERC2 | 0.02 | OrthoFinder | |
| lcl|LHPG02000028.1_cds_PRW05842.1_6009 | PRW05842 | Ultraviolet-B receptor UVR8 | 0.02 | OrthoFinder | |
| lcl|VRMN01000010.1_cds_KAA8492278.1_5461 | KAA8492278 | Ultraviolet-B receptor UVR8 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000808 | origin recognition complex | IEP | Enrichment |
| MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006414 | translational elongation | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015696 | ammonium transport | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0030176 | integral component of endoplasmic reticulum membrane | IEP | Enrichment |
| CC | GO:0031227 | intrinsic component of endoplasmic reticulum membrane | IEP | Enrichment |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Enrichment |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000408 | Reg_chr_condens | 37 | 89 |
| No external refs found! |