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  5. lcl|BLLF01000605.1_cds_GFH13376.1_7853

lcl|BLLF01000605.1_cds_GFH13376.1_7853 (HaLaN_09250, GFH13376)


Aliases : HaLaN_09250, GFH13376

Description : ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0007196 (OrthoFinder) Phylogenetic Tree(s): OG0007196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000605.1_cds_GFH13376.1_7853
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.2 tig00000025_g7909.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000572.4 tig00000572_g2208.t1 ABC transporter B family member 4 OS=Arabidopsis thaliana 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0019905 syntaxin binding IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 94 318
No external refs found!