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  5. lcl|BLLF01000605.1_cds_GFH13375.1_7852

lcl|BLLF01000605.1_cds_GFH13375.1_7852 (HaLaN_09249, GFH13375)


Aliases : HaLaN_09249, GFH13375

Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000605.1_cds_GFH13375.1_7852
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.1 tig00000025_g7909.t2 Solute transport.primary active transport.ABC... 0.03 OrthoFinder
Cpa|evm.model.tig00000572.5 tig00000572_g2208.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Dusal.1095s00001.1 33197946 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
PTI_07G02520.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Sro84_g044670.1 Contig220.g2600 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
SymbC1.scaffold708.8 708.8 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Vocar.0023s0168.1 32883330 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 443 591
IPR003439 ABC_transporter-like_ATP-bd 2 86
IPR011527 ABC1_TM_dom 185 370
No external refs found!