lcl|BLLF01000570.1_cds_GFH13059.1_7536 (HaLaN_08864, GFH13059)

Aliases : HaLaN_08864, GFH13059

Description : Gln-glu non-discriminatory tRNA synthetase

Gene families : OG_01_0001810 (OrthoFinder) Phylogenetic Tree(s): OG0001810_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|BLLF01000570.1_cds_GFH13059.1_7536
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000378.15 tig00000378_g24507.t1 Glutamate--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD30704 No alias Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic... 0.01 OrthoFinder
Transcript_contig_56634 56634 Glutamyl/glutaminyl-tRNA synthetase, class Ib,... 0.01 OrthoFinder
Vocar.0014s0250.1 32888569 Glutamyl/glutaminyl-tRNA synthetase, class Ib,... 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45405.1_1446 PRW45405 Glutamyl-tRNA synthetase isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR020059 Glu/Gln-tRNA-synth_Ib_codon-bd 3 40
No external refs found!