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  5. lcl|BLLF01000553.1_cds_GFH12907.1_7384

lcl|BLLF01000553.1_cds_GFH12907.1_7384 (HaLaN_08686, GFH12907)


Aliases : HaLaN_08686, GFH12907

Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000553.1_cds_GFH12907.1_7384
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.84 tig00000158_g10189.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cpa|evm.model.tig00020554.164 tig00020554_g10943.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cpa|evm.model.tig00020723.5 tig00020723_g13424.t1 ABC transporter C family member 13 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre02.g097800 30785105 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g21250.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.04 OrthoFinder
Dusal.2478s00001.1 33194889 ABC transporter type 1, transmembrane domain [Interproscan]. 0.02 OrthoFinder
EOD33714 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
PTI_02G04530.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro59_g034040.1 Contig571.g7250 Oligomycin resistance ATP-dependent permease YOR1 0.02 OrthoFinder
Vocar.0026s0119.1 32892596 ABC transporter-like; ABC transporter type 1,... 0.04 OrthoFinder
lcl|BLLF01000878.1_cds_GFH15644.1_10121 HaLaN_11905, GFH15644 ABC transporter 0.03 OrthoFinder
lcl|BLLF01003175.1_cds_GFH26596.1_21073 HaLaN_24770, GFH26596 ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
lcl|VRMN01000012.1_cds_KAA8491694.1_5162 KAA8491694 Multidrug resistance-associated protein 1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1168 1316
IPR003439 ABC_transporter-like_ATP-bd 438 568
IPR011527 ABC1_TM_dom 171 375
IPR011527 ABC1_TM_dom 791 1049
No external refs found!