Aliases : HaLaN_08550, GFH12796
Description : PPR_long domain-containing protein
Gene families : OG_01_0005332 (OrthoFinder) Phylogenetic Tree(s): OG0005332_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01000541.1_cds_GFH12796.1_7273 | |
Cluster | HCCA: Cluster_101 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre08.g358250 | 30773680, MCA1 | Pentatricopeptide repeat-containing protein At5g02860... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
MF | GO:0004820 | glycine-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006298 | mismatch repair | IEP | Enrichment |
BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006826 | iron ion transport | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
CC | GO:0016020 | membrane | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
CC | GO:0033573 | high-affinity iron permease complex | IEP | Enrichment |
BP | GO:0034220 | ion transmembrane transport | IEP | Enrichment |
BP | GO:0034755 | iron ion transmembrane transport | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
CC | GO:0098797 | plasma membrane protein complex | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
CC | GO:1902495 | transmembrane transporter complex | IEP | Enrichment |
CC | GO:1905862 | ferroxidase complex | IEP | Enrichment |
CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
CC | GO:1990351 | transporter complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 54 | 96 |
No external refs found! |