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  5. lcl|BLLF01000397.1_cds_GFH11379.1_5856

lcl|BLLF01000397.1_cds_GFH11379.1_5856 (HaLaN_06866, GFH11379)


Aliases : HaLaN_06866, GFH11379

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000397.1_cds_GFH11379.1_5856
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.245 tig00000093_g3667.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000254.3 tig00000254_g22448.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000254.4 tig00000254_g22450.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000405.21 tig00000405_g453.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000498.13 tig00000498_g1589.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000789.56 tig00000789_g4149.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000789.57 tig00000789_g4149.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000882.13 tig00000882_g5258.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020563.92 tig00020563_g11279.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021537.35 tig00021537_g22287.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00021537.36 tig00021537_g22287.t1 No description available 0.01 OrthoFinder
Cre07.g333535 30775361 No description available 0.02 OrthoFinder
Cre10.g444850 30790145, CAV7 No description available 0.03 OrthoFinder
Cre12.g532350 30792883, CAV8 No description available 0.03 OrthoFinder
Cre16.g665100 30777025, CAV3 No description available 0.02 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.03 OrthoFinder
Cre16.g667451 30777477 No description available 0.01 OrthoFinder
Cre17.g720600 30782719, CAV1 No description available 0.03 OrthoFinder
Cz08g09230.t1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
Dusal.0044s00007.1 33194913 Ion transport domain [Interproscan]. 0.03 OrthoFinder
EOD26760 No alias Ion transport domain [Interproscan]. 0.01 OrthoFinder
OT_01G01330.1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
OT_01G06690.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_06G02060.1 No alias Ion transport domain [Interproscan]. 0.01 OrthoFinder
Vocar.0004s0321.1 32889539 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0017s0009.1 32891450 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0039s0004.1 32897784 Ion transport domain [Interproscan]. 0.01 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.01 OrthoFinder
XM_002508757.1 MICPUN_95305, 95305 Voltage-gated ion channel superfamily (CAV1) 0.01 OrthoFinder
XM_003056769.1 MicpuC2_32293, 32293 Voltage-gated ion channel superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 2 176
IPR005821 Ion_trans_dom 201 275
No external refs found!