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  5. lcl|BLLF01000397.1_cds_GFH11376.1_5853

lcl|BLLF01000397.1_cds_GFH11376.1_5853 (HaLaN_06863, GFH11376)


Aliases : HaLaN_06863, GFH11376

Description : SBP domain; BTB/POZ domain [Interproscan].


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000397.1_cds_GFH11376.1_5853
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Cre01.g033900 30788409 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder
Cre02.g085150 30786461 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder
Cre05.g233551 30783356 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder
Cre10.g421550 30790605 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder
Vocar.0001s1587.1 32886106 SBP domain [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0311.1 32890916 SBP domain [Interproscan]. 0.01 OrthoFinder
Vocar.0005s0367.1 32883600 SBP domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20956.1_5003 PRW20956 Squamosa promoter-binding 8 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 1490 1518
IPR004333 SBP_dom 1566 1611
IPR000210 BTB/POZ_dom 28 125
No external refs found!