- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HaLaN_05646, GFH10349
Description : Chlorophyll a-b binding protein, chloroplastic
Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000308.1_cds_GFH10349.1_4826 | |
| Cluster | HCCA: Cluster_91 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g272650 | 30779881, LHCA8 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder | |
| Cre06.g278213 | 30779171, LHCA6 | Chlorophyll a-b binding protein P4, chloroplastic... | 0.02 | OrthoFinder | |
| Cre06.g285250 | 30779463, LHCBM6 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder | |
| Cre10.g425900 | 30790196, LHCA5 | Chlorophyll a-b binding protein 4, chloroplastic... | 0.02 | OrthoFinder | |
| Cre10.g452050 | 30790835, LHCA4 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder | |
| Cre11.g467573 | 30776039, LHCA3 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder | |
| Cre12.g508750 | 30791684, LHCA2 | Photosystem I chlorophyll a/b-binding protein 6,... | 0.02 | OrthoFinder | |
| Cre16.g673650 | 30777655, LHCB5 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder | |
| Cre16.g687900 | 30778224, LHCA7 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.02 | OrthoFinder | |
| Cre17.g720250 | 30782643, LHCB4 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder | |
| Cz01g23030.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz03g26240.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz04g04130.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz04g09210.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz07g02100.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz08g11160.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz09g32070.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz10g10160.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz12g16070.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz15g17110.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz16g14150.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0048s00039.1 | 33189457 | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| Dusal.0125s00005.1 | 33191827 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_01G04980.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| OT_02G03050.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.01 | OrthoFinder | |
| OT_02G04550.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_03G04960.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_05G03910.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_09G04490.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| UNPLg00080.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0011s0017.1 | 32895358 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0025s0135.1 | 32898246 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002503617.1 | MICPUN_104895, 104895 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.02 | OrthoFinder | |
| XM_003054893.1 | MicpuC2_45156, 45156 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.02 | OrthoFinder | |
| XM_003057773.1 | MicpuC2_45464, 45464 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.02 | OrthoFinder | |
| XM_003058148.1 | MicpuC2_70880, 70880 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.02 | OrthoFinder | |
| XM_003059347.1 | MicpuC2_49615, 49615 | Prasinophyte specific chlorophyll a/b-binding protein,... | 0.02 | OrthoFinder | |
| lcl|BLLF01000626.1_cds_GFH13553.1_8030 | HaLaN_09459, GFH13553 | Chlorophyll a-b binding protein, chloroplastic | 0.03 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61161.1_400 | PRW61161 | Chlorophyll a b binding CP29 | 0.02 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61250.1_625 | PRW61250 | Light-harvesting of photosystem I | 0.02 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW57333.1_9090 | PRW57333 | Chlorophyll a b-binding apo CP26 precursor | 0.02 | OrthoFinder | |
| lcl|LHPG02000009.1_cds_PRW56009.1_10248 | PRW56009 | Light-harvesting of photosystem I | 0.02 | OrthoFinder | |
| lcl|LHPG02000011.1_cds_PRW45697.1_1257 | PRW45697 | Light-harvesting of photosystem I | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Enrichment |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005779 | integral component of peroxisomal membrane | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006006 | glucose metabolic process | IEP | Enrichment |
| BP | GO:0006066 | alcohol metabolic process | IEP | Enrichment |
| BP | GO:0006071 | glycerol metabolic process | IEP | Enrichment |
| BP | GO:0006094 | gluconeogenesis | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| BP | GO:0016559 | peroxisome fission | IEP | Enrichment |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Enrichment |
| MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
| MF | GO:0016836 | hydro-lyase activity | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0019203 | carbohydrate phosphatase activity | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Enrichment |
| BP | GO:0019400 | alditol metabolic process | IEP | Enrichment |
| BP | GO:0019751 | polyol metabolic process | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| CC | GO:0031231 | intrinsic component of peroxisomal membrane | IEP | Enrichment |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Enrichment |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| MF | GO:0042132 | fructose 1,6-bisphosphate 1-phosphatase activity | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Enrichment |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0048285 | organelle fission | IEP | Enrichment |
| MF | GO:0050308 | sugar-phosphatase activity | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 41 | 180 |
| No external refs found! |