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  5. Cpa|evm.model.tig00000158.35

Cpa|evm.model.tig00000158.35 (tig00000158_g10147.t1)


Aliases : tig00000158_g10147.t1

Description : Auxin transport protein BIG OS=Oryza sativa subsp. japonica


Gene families : OG_01_0001713 (OrthoFinder) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000158.35
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.23 tig00000158_g10145.t1 Auxin transport protein BIG OS=Oryza sativa subsp. japonica 0.06 OrthoFinder
Cpa|evm.model.tig00000158.29 tig00000158_g10141.t1 No description available 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR025704 E3_Ub_ligase_UBR4 171 347
IPR025704 E3_Ub_ligase_UBR4 348 436
IPR025704 E3_Ub_ligase_UBR4 58 153
IPR025704 E3_Ub_ligase_UBR4 500 596
No external refs found!