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  5. lcl|BLLF01000191.1_cds_GFH08872.1_3349

lcl|BLLF01000191.1_cds_GFH08872.1_3349 (HaLaN_03911, GFH08872)


Aliases : HaLaN_03911, GFH08872

Description : T-complex 1 subunit beta


Gene families : OG_01_0003436 (OrthoFinder) Phylogenetic Tree(s): OG0003436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000191.1_cds_GFH08872.1_3349
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.30 tig00020903_g15096.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder
Cre09.g416750 30781340, CCT2 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder
Cz12g27040.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.09 OrthoFinder
Dusal.0437s00014.1 33198276 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
EOD03984 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
EOD34861 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
OT_08G02610.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
PTI_20G02770.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
Sro2362_g324860.1 Contig1769.g15640 Thermosome subunit beta (Fragment) 0.07 OrthoFinder
TP04G07770.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Vocar.0011s0268.1 32895339 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_002508232.1 MICPUN_108805, 108805 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
XM_003058918.1 MicpuC2_45559, 45559 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491891.1_4899 KAA8491891 Putative T-complex protein 1 subunit beta 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 153 327
IPR002423 Cpn60/TCP-1 31 140
No external refs found!