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Aliases : HaLaN_02359, GFH07543
Description : Putative RNA methyltransferase [Interproscan].
Gene families : OG_01_0004211 (OrthoFinder) Phylogenetic Tree(s): OG0004211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000102.1_cds_GFH07543.1_2020 | |
| Cluster | HCCA: Cluster_38 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz07g25100.t1 | No alias | Putative RNA methyltransferase [Interproscan]. | 0.03 | OrthoFinder | |
| PTI_13G02460.1 | No alias | Putative RNA methyltransferase [Interproscan]. | 0.06 | OrthoFinder | |
| Sro979_g227280.1 | Contig4114.g31410 | Putative methyltransferase C9orf114 | 0.02 | OrthoFinder | |
| TP05G02450.1 | No alias | Putative RNA methyltransferase [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000776 | kinetochore | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0008238 | exopeptidase activity | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| CC | GO:0031262 | Ndc80 complex | IEP | Enrichment |
| MF | GO:0031369 | translation initiation factor binding | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| MF | GO:0051287 | NAD binding | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0099080 | supramolecular complex | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003750 | Put_MeTrfase | 32 | 325 |
| No external refs found! |