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  5. lcl|BLLF01000066.1_cds_GFH06969.1_1446

lcl|BLLF01000066.1_cds_GFH06969.1_1446 (HaLaN_01697, GFH06969)


Aliases : HaLaN_01697, GFH06969

Description : Vacuolar protein sorting-associated protein 54, N-terminal [Interproscan].


Gene families : OG_01_0003450 (OrthoFinder) Phylogenetic Tree(s): OG0003450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000066.1_cds_GFH06969.1_1446
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
Cre10.g443350 30790503 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 OrthoFinder
PTI_21G00880.1 No alias Syndetin, C-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP Enrichment
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Enrichment
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032422 purine-rich negative regulatory element binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR019515 VPS54_N 3 245
No external refs found!