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  5. lcl|BLLF01000062.1_cds_GFH06898.1_1375

lcl|BLLF01000062.1_cds_GFH06898.1_1375 (HaLaN_01614, GFH06898)


Aliases : HaLaN_01614, GFH06898

Description : RRM domain-containing protein


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000062.1_cds_GFH06898.1_1375
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cz08g24230.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Cz17g16110.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Dusal.0028s00033.1 33198481 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
Sro1655_g289020.1 Contig2908.g23148 Stimulation factor subunit 2 tau variant 0.01 OrthoFinder
Sro1843_g301200.1 Contig4701.g34968 SC35-like splicing factor 0.01 OrthoFinder
TP16G00570.1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Vocar.0037s0092.1 32897541 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 16 67
No external refs found!