lcl|BLLF01000050.1_cds_GFH06670.1_1147 (HaLaN_01339, GFH06670)


Aliases : HaLaN_01339, GFH06670

Description : Actin family [Interproscan].


Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000050.1_cds_GFH06670.1_1147
Cluster HCCA: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Cz05g19150.t1 No alias Actin family [Interproscan]. 0.02 OrthoFinder
Cz15g13070.t1 No alias Actin family [Interproscan]. 0.02 OrthoFinder
Dusal.0005s00041.1 33196958 Actin family [Interproscan]. 0.02 OrthoFinder
Dusal.0038s00017.1 33192343 Actin family [Interproscan]. 0.02 OrthoFinder
EOD32708 No alias Actin family [Interproscan]. 0.03 OrthoFinder
EOD32710 No alias Putative actin [Ensembl]. 0.02 OrthoFinder
SymbC1.scaffold10261.1 10261.1 Actin family [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2366.6 2366.6 Actin family [Interproscan]. 0.02 OrthoFinder
TP10G01770.1 No alias Actin family [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54960 54960 Actin family [Interproscan]. 0.03 OrthoFinder
Vocar.0043s0003.1 32886892 Actin family [Interproscan]. 0.02 OrthoFinder
XM_002504830.1 MICPUN_62425, 62425 Actin superfamily 0.05 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59601.1_6691 PRW59601 Actin 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR004000 Actin 1 150
IPR004000 Actin 163 268
No external refs found!