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  5. lcl|BLLF01000046.1_cds_GFH06595.1_1072

lcl|BLLF01000046.1_cds_GFH06595.1_1072 (HaLaN_01250, GFH06595)


Aliases : HaLaN_01250, GFH06595

Description : Ribosomal protein L11 methyltransferase (PrmA) [Interproscan].


Gene families : OG_01_0002244 (OrthoFinder) Phylogenetic Tree(s): OG0002244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000046.1_cds_GFH06595.1_1072
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Dusal.0130s00021.1 33193216 Methyltransferase domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492045.1_5228 KAA8492045 HemK methyltransferase family member 1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!