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  5. Cpa|evm.model.tig00021281.10

Cpa|evm.model.tig00021281.10 (tig00021281_g19911.t1)


Aliases : tig00021281_g19911.t1

Description : Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease


Gene families : OG_01_0003575 (OrthoFinder) Phylogenetic Tree(s): OG0003575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021281.10
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cre24.g755447 30782900 No description available 0.02 OrthoFinder
Dusal.0193s00019.1 33196110 Pre-mRNA-splicing factor Cwf15/Cwc15 [Interproscan]. 0.02 OrthoFinder
Sro671_g184970.1 Contig562.g7154 Spliceosome-associated protein CWC15 homolog 0.02 OrthoFinder
Transcript_contig_54418 54418 Pre-mRNA-splicing factor Cwf15/Cwc15 [Interproscan]. 0.01 OrthoFinder
UNPLg00019.t1 No alias Pre-mRNA-splicing factor Cwf15/Cwc15 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0005681 spliceosomal complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR006973 Cwf_Cwc_15 1 228
IPR022764 Peptidase_S54_rhomboid_dom 360 519
No external refs found!