Description : Chromo domain; Helicase, C-terminal; SNF2-related, N-terminal domain; Zinc finger, CXXC-type [Interproscan].
Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD41956 | |
Cluster | HCCA: Cluster_266 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000350.9 | tig00000350_g24309.t1 | CHD3-type chromatin-remodeling factor PICKLE... | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00000691.35 | tig00000691_g3188.t1 | Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00000983.26 | tig00000983_g5915.t1 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00020960.24 | tig00020960_g16545.t1 | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cre03.g158550 | 30787160 | CHD3-type chromatin-remodeling factor PICKLE... | 0.01 | OrthoFinder | |
Cre03.g179300 | 30786668 | RNA biosynthesis.RNA polymerase II-dependent... | 0.01 | OrthoFinder | |
Cre07.g325700 | 30774388 | ATP-dependent helicase BRM OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre09.g390000 | 30781417 | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | OrthoFinder | |
Cz02g31160.t1 | No alias | Helicase, C-terminal; SLIDE domain; SNF2-related,... | 0.02 | OrthoFinder | |
Cz04g03240.t1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
Cz04g34020.t1 | No alias | Helicase, C-terminal; Chromo domain; SNF2-related,... | 0.01 | OrthoFinder | |
Cz05g37180.t1 | No alias | SNF2-related, N-terminal domain; Helicase, C-terminal... | 0.02 | OrthoFinder | |
Cz16g07230.t1 | No alias | SNF2-related, N-terminal domain [Interproscan]. | 0.02 | OrthoFinder | |
Cz19g07040.t1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.02 | OrthoFinder | |
Dusal.0357s00004.1 | 33189829 | SNF2-related, N-terminal domain; Helicase, C-terminal;... | 0.03 | OrthoFinder | |
Dusal.0752s00003.1 | 33199467 | HEAT-like repeat [Interproscan]. | 0.02 | OrthoFinder | |
OT_01G05670.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.05 | OrthoFinder | |
OT_06G03660.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.04 | OrthoFinder | |
PTI_10G00070.1 | No alias | Helicase, C-terminal; High mobility group box domain;... | 0.02 | OrthoFinder | |
PTI_12G03630.1 | No alias | SLIDE domain; Helicase, C-terminal; SNF2-related,... | 0.01 | OrthoFinder | |
PTI_24G01280.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
Sro1151_g246720.1 | Contig4710.g35023 | CHD3-type chromatin-remodeling factor | 0.02 | OrthoFinder | |
Sro125_g060200.1 | Contig2833.g22731 | Chromodomain-helicase-DNA-binding protein | 0.05 | OrthoFinder | |
Sro1796_g298120.1 | Contig441.g5925 | Probable chromatin-remodeling complex ATPase chain | 0.04 | OrthoFinder | |
Sro264_g102660.1 | Contig921.g9692 | Probable chromatin-remodeling complex ATPase chain | 0.02 | OrthoFinder | |
Sro272_g104840.1 | Contig2144.g18025 | Chromodomain-helicase-DNA-binding protein | 0.03 | OrthoFinder | |
Sro29_g019150.1 | Contig1384.g12758 | CHD3-type chromatin-remodeling factor CHR7 | 0.01 | OrthoFinder | |
Sro566_g167850.1 | Contig3739.g28680 | ISWI chromatin-remodeling complex ATPase ISW2 | 0.02 | OrthoFinder | |
TP11G02170.1 | No alias | SNF2-related, N-terminal domain; Chromo domain;... | 0.02 | OrthoFinder | |
Transcript_contig_67487 | 67487 | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
XM_002502289.1 | MICPUN_58978, 58978 | SNF2 super family | 0.02 | OrthoFinder | |
XM_002503125.1 | MICPUN_91017, 91017 | SNF2 super family | 0.02 | OrthoFinder | |
XM_003061313.1 | MicpuC2_50939, 50939 | SNF2 super family | 0.01 | OrthoFinder | |
XM_003062178.1 | MicpuC2_21039, 21039 | SNF2 super family | 0.01 | OrthoFinder | |
XM_003062821.1 | MicpuC2_52710, 52710 | FY-rich, N-terminal; Helicase, C-terminal; FY-rich,... | 0.01 | OrthoFinder | |
lcl|BLLF01000001.1_cds_GFH05550.1_27 | HaLaN_00030, GFH05550 | SNF2-related, N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
lcl|BLLF01001410.1_cds_GFH19126.1_13603 | HaLaN_16027, GFH19126 | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
lcl|LHPG02000008.1_cds_PRW56740.1_9705 | PRW56740 | Chromatin-remodeling complex ATPase chain | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Enrichment |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Enrichment |
MF | GO:0003774 | motor activity | IEP | Enrichment |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Enrichment |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Enrichment |
MF | GO:0004329 | formate-tetrahydrofolate ligase activity | IEP | Enrichment |
MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Enrichment |
MF | GO:0004637 | phosphoribosylamine-glycine ligase activity | IEP | Enrichment |
MF | GO:0005049 | nuclear export signal receptor activity | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
CC | GO:0005694 | chromosome | IEP | Enrichment |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Enrichment |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Enrichment |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Enrichment |
BP | GO:0006077 | (1->6)-beta-D-glucan metabolic process | IEP | Enrichment |
BP | GO:0006078 | (1->6)-beta-D-glucan biosynthetic process | IEP | Enrichment |
BP | GO:0006144 | purine nucleobase metabolic process | IEP | Enrichment |
BP | GO:0006471 | protein ADP-ribosylation | IEP | Enrichment |
BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009112 | nucleobase metabolic process | IEP | Enrichment |
BP | GO:0009113 | purine nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0009250 | glucan biosynthetic process | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
CC | GO:0016459 | myosin complex | IEP | Enrichment |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Enrichment |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Enrichment |
CC | GO:0030131 | clathrin adaptor complex | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Enrichment |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Enrichment |
MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
BP | GO:0042592 | homeostatic process | IEP | Enrichment |
BP | GO:0044042 | glucan metabolic process | IEP | Enrichment |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Enrichment |
BP | GO:0045454 | cell redox homeostasis | IEP | Enrichment |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
MF | GO:0046527 | glucosyltransferase activity | IEP | Enrichment |
MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Enrichment |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Enrichment |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
CC | GO:0098797 | plasma membrane protein complex | IEP | Enrichment |
MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Enrichment |
MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
No external refs found! |