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  5. EOD41788

EOD41788


Description : RAP domain [Interproscan].


Gene families : OG_01_0012069 (OrthoFinder) Phylogenetic Tree(s): OG0012069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD41788
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
TP11G01780.1 No alias RAP domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR013584 RAP 247 289
No external refs found!