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  5. EOD41135

EOD41135


Description : Strawberry notch, AAA domain; Strawberry notch, helicase C domain [Interproscan].


Gene families : OG_01_0000467 (OrthoFinder) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD41135
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cre01.g053250 30789240 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre07.g350100 30774786 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre13.g578501 30784198 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz04g33080.t1 No alias Strawberry notch, helicase C domain; Strawberry notch,... 0.02 OrthoFinder
Cz08g14040.t1 No alias Strawberry notch, helicase C domain;... 0.01 OrthoFinder
Cz08g29260.t1 No alias Strawberry notch, helicase C domain; Zinc finger,... 0.02 OrthoFinder
EOD16011 No alias Strawberry notch, helicase C domain [Interproscan]. 0.04 OrthoFinder
OT_03G05510.1 No alias Strawberry notch, helicase C domain; Strawberry notch,... 0.05 OrthoFinder
Sro106_g053630.1 Contig1122.g10760 Strawberry notch homolog 2 0.04 OrthoFinder
SymbC1.scaffold1482.6 1482.6 Strawberry notch, AAA domain; Strawberry notch, helicase... 0.02 OrthoFinder
TP02G01100.1 No alias Strawberry notch, AAA domain; Strawberry notch, helicase... 0.02 OrthoFinder
Vocar.0001s0130.1 32884628 Strawberry notch, AAA domain; Strawberry notch, helicase... 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58082.1_8009 PRW58082 Strawberry notch-like protein 1-like 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR039187 SNO_AAA 165 484
IPR026937 SBNO_Helicase_C_dom 1143 1325
No external refs found!