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  5. EOD39444

EOD39444


Description : tRNA wybutosine-synthesis; Flavodoxin/nitric oxide synthase; Radical SAM [Interproscan].


Gene families : OG_01_0004576 (OrthoFinder) Phylogenetic Tree(s): OG0004576_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD39444
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Cre14.g623300 30776583, NCR1 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine... 0.01 OrthoFinder
Vocar.0022s0182.1 32891948 Radical SAM; tRNA wybutosine-synthesis;... 0.03 OrthoFinder
XM_002499429.1 MICPUN_78848, 78848 Flavodoxin/nitric oxide synthase; tRNA... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0010181 FMN binding IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 370 561
IPR013917 tRNA_wybutosine-synth 563 632
IPR008254 Flavodoxin/NO_synth 65 207
No external refs found!