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  5. Cpa|evm.model.tig00021238.17

Cpa|evm.model.tig00021238.17 (tig00021238_g19554.t1)


Aliases : tig00021238_g19554.t1

Description : DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana


Gene families : OG_01_0000386 (OrthoFinder) Phylogenetic Tree(s): OG0000386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021238.17
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Cre10.g446650 30790222 Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder
Sro610_g175200.1 No alias Putative U5 small nuclear ribonucleoprotein 200 kDa helicase 0.01 OrthoFinder
lcl|BLLF01002113.1_cds_GFH22736.1_17213 HaLaN_20248, GFH22736 RNA helicase, activating signal cointegrator 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004179 Sec63-dom 892 960
IPR004179 Sec63-dom 1711 1967
IPR004179 Sec63-dom 1013 1153
IPR011545 DEAD/DEAH_box_helicase_dom 1193 1349
IPR011545 DEAD/DEAH_box_helicase_dom 410 581
No external refs found!